Dr.-Ing. Jan Voges
Leibniz Universität Hannover
Institut für Informationsverarbeitung
Appelstr. 9A
30167 Hannover
Germany
phone: +49 511 762-5329
fax: +49 511 762-5333
office location: room 1306

Jan Voges studied electrical engineering at Leibniz University Hannover, majoring in communications engineering. He received his Dipl.-Ing. degree from Leibniz University Hannover in 2015. After graduation, he joined the Institute for Information Processing at Leibniz University Hannover as a research assistant, where he pioneered the compression and standardization of genomics data. In 2018, he worked as a visiting scientist at the Carl R. Woese Institute for Genomic Biology at the University of Illinois Urbana-Champaign, where he contributed to a project to automate and accelerate the analysis of DNA sequencing data at Mayo Clinic. In 2022, he received his Dr.-Ing. degree — passed with distinction — from Leibniz University Hannover for his work on Compression of DNA Sequencing Data. Since 2022, he is leader of the Genomic Data Science group at Institute for Information Processing / L3S at Leibniz University Hannover. His research focuses on machine learning, bioinformatics and computational biology. He has a special interest in international standardization, proposal writing, project management, IP generation and software engineering.

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Show recent publications only
  • Conference Contributions
    • Christian Rohlfing, Thibaut Meyer, Jens Schneider, Jan Voges
      Python Wrapper for Context-based Adaptive Binary Arithmetic Coding
      2023 IEEE International Conference on Visual Communications and Image Processing (VCIP), December 2023
    • Fabian Müntefering, Jörn Ostermann, Jan Voges
      BACON: Bacterial Clone Recognition from Metagenomic Sequencing Data
      AICPM 2023, Hannover (DE), September 2023
    • Yeremia Gunawan Adhisantoso, Jan Voges, Jörn Ostermann
      PEKORA: High-Performance 3D Genome Reconstruction Using K-th Order Spearman's Rank Correlation Approximation
      ISMB/ECCB 2023, Lyon (FR), July 2023
    • Idoia Ochoa, Hongyi Li, Florian Baumgarte, Charles Hergenrother, Jan Voges, Mikel Hernaez
      AliCo: A New Efficient Representation for SAM Files
      2019 Data Compression Conference (DCC), pp. 93-102, March 2019
    • Thorsten Laude, Yeremia Gunawan Adhisantoso, Jan Voges, Marco Munderloh, Jörn Ostermann
      A Comparison of JEM and AV1 with HEVC: Coding Tools, Coding Efficiency and Complexity
      2018 Picture Coding Symposium (PCS), pp. 36-40, June 2018
    • Ana A. Hernandez-Lopez, Jan Voges, Claudio Alberti, Marco Mattavelli, Jörn Ostermann
      Lossy Compression of Quality Scores in Differential Gene Expression: A First Assessment and Impact Analysis
      2018 Data Compression Conference (DCC), pp. 167-176, March 2018
    • Ana A. Hernandez-Lopez, Jan Voges, Claudio Alberti, Marco Mattavelli, Jörn Ostermann
      Differential Gene Expression with Lossy Compression of Quality Scores in RNA-Seq Data
      2017 Data Compression Conference (DCC), p. 444, April 2017
    • Claudio Alberti, Noah Daniels, Mikel Hernaez, Jan Voges, Rachel L. Goldfeder, Ana A. Hernandez-Lopez, Marco Mattavelli, Bonnie Berger
      An Evaluation Framework for Lossy Compression of Genome Sequencing Quality Values
      2016 Data Compression Conference (DCC), pp. 221-230, March 2016
    • Jan Voges, Marco Munderloh, Jörn Ostermann
      Predictive Coding of Aligned Next-Generation Sequencing Data
      2016 Data Compression Conference (DCC), pp. 241-250, March 2016
  • Journals
    • Yeremia Gunawan Adhisantoso, Jan Voges, Christian Rohlfing, Viktor Tunev, Jens-Rainer Ohm, Jörn Ostermann
      GVC: efficient random access compression for gene sequence variations
      BMC Bioinformatics, Vol. 24, No. 1, p. 121, March 2023
    • Jan Voges, Mikel Hernaez, Marco Mattavelli, Jörn Ostermann
      An Introduction to MPEG-G: The First Open ISO/IEC Standard for the Compression and Exchange of Genomic Sequencing Data
      Proceedings of the IEEE, Vol. 109, No. 9, pp. 1607-1622, September 2021
    • Jan Voges, Tom Paridaens, Fabian Müntefering, Liudmila S. Mainzer, Brian Bliss, Mingyu Yang, Idoia Ochoa, Jan Fostier, Jörn Ostermann, Mikel Hernaez
      GABAC: an arithmetic coding solution for genomic data
      Bioinformatics, Vol. 36, No. 7, pp. 2275-2277, April 2020
    • Thorsten Laude, Yeremia Gunawan Adhisantoso, Jan Voges, Marco Munderloh, Jörn Ostermann
      A Comprehensive Video Codec Comparison
      APSIPA Transactions on Signal and Information Processing, Vol. 8, No. 1, November 2019
    • Jan Voges, Ali Fotouhi, Jörn Ostermann, M. Oguzhan Külekci
      A Two-level Scheme for Quality Score Compression
      Journal of Computational Biology, Vol. 25, No. 10, pp. 1141-1151, October 2018
    • Jan Voges, Jörn Ostermann, Mikel Hernaez
      CALQ: compression of quality values of aligned sequencing data
      Bioinformatics, Vol. 34, No. 10, pp. 1650-1658, May 2018
    • Ibrahim Numanagic, James K. Bonfield, Faraz Hach, Jan Voges, Jörn Ostermann, Claudio Alberti, Marco Mattavelli, S. Cenk Sahinalp
      Comparison of high-throughput sequencing data compression tools
      Nature Methods, Vol. 13, No. 12, pp. 1005-1008, December 2016
  • Books
    • Jan Voges
      Compression of DNA Sequencing Data
      VDI Verlag, 2022
  • Standardisation Contributions
    • Yeremia Gunawan Adhisantoso, Jan Voges
      Cross-check of M62859 Results on Updated CE Results for Annotation Data Indexing Using B-Tree
      ISO/IEC JTC 1/SC 29/WG 8, April 2023
    • Yeremia Gunawan Adhisantoso, Christian Rohlfing, Jan Voges, Jörn Ostermann
      Extension to method for the coding of genomic variants m55355
      ISO/IEC JTC 1/SC 29/WG 8 , October 2020
    • Yeremia Gunawan Adhisantoso, Christian Rohlfing, Jan Voges, Jörn Ostermann
      Method for the coding of genotype likelihood of variant m55356
      ISO/IEC JTC 1/SC 29/WG 8 , October 2020
    • Yeremia Gunawan Adhisantoso, Viktor Tunev, Jan Voges, Christian Rohlfing,
      MPEG-G Part 6 CE3 Results Leibniz University Hannover, RWTH Aachen University m53496
      ISO/IEC JTC1/SC29/WG11, April 2020
    • Jörn Ostermann, Berend Denkena, Benjamin Bergmann, Alexander Schmidt, Thomas Krause, Jan Voges
      Compression of Machine Tool Data
      ISO/IEC JTC1/SC29/WG11, July 2019